Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847934.1_cds_XP_016510242.1_23101
CDS Infomation

[gene=LOC107827589] [db_xref=GeneID:107827589] [protein=26S protease regulatory subunit 6A homolog] [protein_id=XP_016510242.1] [location=join(154669..154785,154885..155001,155686..155793,156439..156822,157716..157834,157977..158064,158282..158401,158523..158663,160245..160322)] [gbkey=CDS]
Sequence

ATGGCAACGGCGATGGCTGAGGATAGCAACTTCGAAGACGATCAGCTCCATGCTATGTCC
ACTGATGATATTATTAGGGCTTCTCGCCTTCTGGACAATGAAATTCGAATCATTAGGGAA
GAGCTACAGAGGACGAATCTAGAGGTGGATTCGTTCAAGGAGAAGATAAAGGAGAATCAA
GAGAAAATTAAGCTCAATAAACAACTTCCTTACTTGGTCGGCAACATTGTTGAGATTTTG
GAGATGAATCCAGAGGAAGAAGCTGAGGAGGATGGTGCAAATATTGATCTCGACTCACAA
AGGAAGGGAAAGTGTGTTGTACTGAAAACATCCACGCGTCAGACAATTTTCTTGCCTGTC
GTTGGCCTTGTTGATCCTGACAATTTGAAACCTGGTGATCTGGTTGGAGTAAACAAAGAC
AGTTATTTGATATTGGATACTTTGCCATCTGAATATGACTCTCGGGTTAAGGCAATGGAA
GTTGATGAAAAGCCAACTGAAGACTACAATGACATTGGAGGCTTGGAGAAACAGATTCAA
GAACTTGTCGAGGCAATTGTTTTGCCTATGACACACAAGGAACGATTCCAGAAATTAGGC
GTTCGTCCTCCAAAGGGAGTCCTTTTGTATGGGCCTCCAGGGACTGGGAAAACACTCATG
GCTCGAGCCTGTGCTGCACAGACAAATGCTACTTTTCTTAAGCTAGCTGGACCCCAGCTC
GTGCAGATGTTCATTGGAGATGGCGCAAAACTTGTTCGTGATGCTTTCGAGCTGGCAAAG
GAGAAATCACCTTGCATTATTTTCATTGATGAGATTGATGCTATAGGCACAAAGCGTTTT
GATAGCGAAGTTAGTGGGGATCGAGAGGTCCAACGAACTATGTTGGAGTTACTTAATCAG
CTCGATGGTTTTAGCAGTGATGATCGGATTAAGGTAATAGCTGCAACAAACAGAGCTGAT
ATTTTGGATCCTGCTTTGATGAGATCTGGTCGATTGGATCGTAAGATTGAGTTCCCCCAC
CCAACAGAGGAAGCCAGGGCTAGGATCTTGCAGATCCACTCCAGAAAGATGAATGTTAAC
CCAGACGTTAATTTTGAAGAATTGGCTCGATCAACAGATGATTTTAATGGGGCACAATTG
AAAGCTGTATGTGTTGAGGCAGGCATGCTAGCACTTCGTCGCGATGCCACCGAGGTTACG
CATGAAGACTTCAACGAAGGTATCATTCAAGTTCAAGCCAAGAAGAAAGCCAGCTTAAAC
TACTATGCCTAA

Peptide Sequence

PEP ID

XP_016510242.1
PEP Infomation

PREDICTED: 26S protease regulatory subunit 6A homolog [Nicotiana tabacum]
Sequence

MATAMAEDSNFEDDQLHAMSTDDIIRASRLLDNEIRIIREELQRTNLEVDSFKEKIKENQ
EKIKLNKQLPYLVGNIVEILEMNPEEEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
VGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ
ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL
VQMFIGDGAKLVRDAFELAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVN
PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKKKASLN
YYA

Transcript Sequence

Gene sequence data has not been registered.